Analyzing bacterial resequencing data with breseqΒΆ

Author:Jeff Barrick
Date:June 8, 2010

breseq is a bacterial resequencing analysis pipeline initially developed in Rich Lenski’s lab at MSU for use in analyzing the Long Term Evolution Experiment resequencing data.

First, go through Installing breseq.

Now, here are some tutorials for your delectation!

Tutorial 1: breseq test drive

Tutorial 2: Analyzing genome mutations

Tutorial 3: Finding transposon insertions with breseq

Tutorial 4: Analyzing mixed populations with breseq


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